- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | braFlo1-63 | mir-1781 | gga-miR-1781 | 19/21 | chrUn | + | 14-34 | 681272641-681272715 | 0.849901 | Ortholog | 1/4 | 1/4 |
2 | braFlo1-69 | mir-450 | mmu-miR-450a-3p | 20/22 | chrUn | + | 14-35 | 721079297-721079378 | 0.937541 | Ortholog | 8/17 | 1/34 |
3 | braFlo1-19 | mir-1752 | gga-miR-1752 | 19/21 | chrUn | + | 29-49 | 330281112-330281209 | 0.851604 | Ortholog | 1/3 | 1/3 |
4 | braFlo1-72 | mir-206 | mdo-miR-206 | 19/21 | chrUn | + | 32-51 | 852065465-852065564 | 0.932267 | Ortholog | 14/30 | 2/41 |
5 | braFlo1-2 | mir-206 | mdo-miR-206 | 19/21 | chrUn | + | 32-51 | 8810763-8810862 | 0.853017 | Ortholog | 14/30 | 2/41 |
6 | braFlo1-52 | mir-1814 | gga-miR-1814 | 18/20 | chrUn | + | 35-53 | 650043116-650043219 | 0.916631 | Ortholog | 1/42 | 1/174 |
7 | braFlo1-37 | mir-1959 | mmu-miR-1959 | 18/20 | chrUn | + | 46-63 | 529677171-529677258 | 0.892763 | Ortholog | 1/10 | 4/166 |
8 | braFlo1-10 | mir-1504 | odi-miR-1504 | 19/21 | chrUn | + | 46-66 | 189558510-189558587 | 0.931417 | Ortholog | 1/8 | 1/8 |
9 | braFlo1-77 | mir-1603 | gga-miR-1603 | 19/21 | chrUn | + | 47-66 | 855711551-855711633 | 0.989034 | Ortholog | 1/4 | 1/4 |
10 | braFlo1-61 | mir-1294 | hsa-miR-1294 | 20/22 | chrUn | + | 48-69 | 672685554-672685630 | 0.922917 | Ortholog | 2/5 | 1/6 |
11 | braFlo1-1 | mir-1405 | oan-miR-1405* | 20/21 | chrUn | + | 49-69 | 6982728-6982811 | 0.85941 | Ortholog | 1/2 | 1/2 |
12 | braFlo1-73 | mir-285 | bmo-miR-285 | 20/22 | chrUn | + | 49-70 | 853767758-853767839 | 0.999811 | Ortholog | 12/14 | 1/14 |
13 | braFlo1-57 | mir-99 | gga-miR-99a* | 19/21 | chrUn | + | 49-69 | 670131049-670131130 | 0.997218 | Ortholog | 17/32 | 2/46 |
14 | braFlo1-38 | mir-99 | gga-miR-99a* | 19/21 | chrUn | + | 49-69 | 544468867-544468948 | 0.997218 | Ortholog | 17/32 | 2/46 |
15 | braFlo1-84 | mir-1657 | gga-miR-1657 | 21/23 | chrUn | + | 50-72 | 872439666-872439739 | 0.942569 | Ortholog | 1/4 | 1/4 |
16 | braFlo1-83 | mir-305 | dme-miR-305 | 22/23 | chrUn | + | 50-72 | 862869070-862869162 | 0.932778 | Ortholog | 16/19 | 1/23 |
17 | braFlo1-17 | mir-802 | oan-miR-802* | 19/21 | chrUn | + | 50-70 | 296934315-296934393 | 0.983806 | Ortholog | 6/22 | 2/24 |
18 | braFlo1-18 | mir-802 | oan-miR-802* | 19/21 | chrUn | + | 50-70 | 303522127-303522205 | 0.983806 | Ortholog | 6/22 | 2/24 |
19 | braFlo1-28 | mir-553 | mml-miR-553 | 19/21 | chrUn | + | 51-71 | 462125548-462125633 | 0.927035 | Ortholog | 3/9 | 1/13 |
20 | braFlo1-20 | mir-2015 | aqu-miR-2015* | 19/21 | chrUn | + | 51-71 | 338584607-338584689 | 0.974955 | Ortholog | 1/3 | 2/4 |
21 | braFlo1-6 | mir-1627 | gga-miR-1627* | 19/21 | chrUn | + | 51-71 | 116878441-116878535 | 0.924375 | Ortholog | 1/4 | 1/4 |
22 | braFlo1-85 | mir-578 | cfa-miR-578 | 19/21 | chrUn | + | 51-71 | 893593105-893593184 | 0.955195 | Ortholog | 3/5 | 1/5 |
23 | braFlo1-25 | mir-745 | lgi-miR-745a | 20/21 | chrUn | + | 51-71 | 435332659-435332739 | 0.999588 | Ortholog | 3/8 | 1/10 |
24 | braFlo1-11 | mir-1644 | gga-miR-1644 | 19/21 | chrUn | + | 51-71 | 194912146-194912227 | 0.892646 | Ortholog | 1/3 | 1/3 |
25 | braFlo1-88 | mir-1692 | gga-miR-1692 | 18/20 | chrUn | + | 52-70 | 896531820-896531916 | 0.994603 | Ortholog | 1/17 | 1/34 |
26 | braFlo1-70 | mir-620 | hsa-miR-620 | 18/20 | chrUn | + | 52-70 | 772544219-772544310 | 0.908912 | Ortholog | 1/3 | 1/3 |
27 | braFlo1-27 | mir-153 | gga-miR-153 | 19/20 | chrUn | + | 52-71 | 461150711-461150795 | 0.996425 | Ortholog | 23/36 | 1/55 |
28 | braFlo1-16 | mir-1701 | gga-miR-1701 | 18/20 | chrUn | + | 52-70 | 264254395-264254478 | 0.987977 | Ortholog | 1/19 | 2/41 |
29 | braFlo1-171 | mir-1638 | gga-miR-1638 | 18/20 | chrUn | - | 2-20 | 687029524-687029594 | 0.909431 | Ortholog | 1/23 | 1/58 |
30 | braFlo1-180 | mir-1894 | mmu-miR-1894-3p | 20/22 | chrUn | - | 8-29 | 758204617-758204695 | 0.865859 | Ortholog | 1/11 | 1/13 |
31 | braFlo1-105 | mir-263 | bmo-miR-263a | 19/21 | chrUn | - | 17-36 | 160839430-160839515 | 0.999685 | Ortholog | 16/26 | 2/53 |
32 | braFlo1-107 | mir-263 | bmo-miR-263a | 19/21 | chrUn | - | 17-36 | 161012955-161013040 | 0.999685 | Ortholog | 16/26 | 2/53 |
33 | braFlo1-187 | mir-954 | dme-miR-954 | 19/21 | chrUn | - | 19-39 | 879934313-879934401 | 0.845705 | Ortholog | 1/4 | 1/4 |
34 | braFlo1-111 | mir-1287 | bta-miR-1287 | 20/22 | chrUn | - | 20-41 | 213280606-213280696 | 0.997234 | Ortholog | 2/15 | 1/15 |
35 | braFlo1-132 | mir-1796 | gga-miR-1796 | 19/21 | chrUn | - | 21-41 | 359963291-359963380 | 0.839189 | Ortholog | 1/5 | 1/6 |
36 | braFlo1-92 | mir-329 | cfa-miR-329a | 21/23 | chrUn | - | 27-49 | 13790823-13790915 | 0.923573 | Ortholog | 7/20 | 1/33 |
37 | braFlo1-102 | mir-409 | rno-miR-409-3p | 18/20 | chrUn | - | 33-51 | 77789173-77789274 | 0.905946 | Ortholog | 7/16 | 1/16 |
38 | braFlo1-93 | mir-1380 | oan-miR-1380 | 19/21 | chrUn | - | 34-54 | 14816776-14816842 | 0.897275 | Ortholog | 1/4 | 1/4 |
39 | braFlo1-91 | mir-1654 | gga-miR-1654 | 19/21 | chrUn | - | 35-54 | 3666650-3666754 | 0.936541 | Ortholog | 1/9 | 1/10 |
40 | braFlo1-178 | mir-1959 | mmu-miR-1959 | 18/20 | chrUn | - | 46-63 | 741444657-741444744 | 0.850219 | Ortholog | 1/10 | 4/166 |
41 | braFlo1-166 | mir-1959 | mmu-miR-1959 | 18/20 | chrUn | - | 49-66 | 563558230-563558320 | 0.837133 | Ortholog | 1/10 | 4/166 |
42 | braFlo1-137 | mir-1299 | ptr-miR-1299 | 19/21 | chrUn | - | 49-68 | 387243244-387243324 | 0.968958 | Ortholog | 2/6 | 1/6 |
43 | braFlo1-128 | mir-141 | ppa-miR-141 | 19/21 | chrUn | - | 50-69 | 318452054-318452136 | 0.999954 | Ortholog | 14/29 | 1/41 |
44 | braFlo1-175 | mir-78 | cin-miR-78 | 19/21 | chrUn | - | 50-69 | 716733963-716734042 | 0.973509 | Ortholog | 2/8 | 1/8 |
45 | braFlo1-176 | mir-2015 | aqu-miR-2015* | 19/21 | chrUn | - | 50-70 | 722912959-722913038 | 0.992175 | Ortholog | 1/3 | 2/4 |
46 | braFlo1-131 | mir-1594 | gga-miR-1594 | 20/21 | chrUn | - | 50-70 | 321650676-321650779 | 0.806595 | Ortholog | 1/15 | 1/24 |
47 | braFlo1-177 | mir-1959 | mmu-miR-1959 | 18/20 | chrUn | - | 51-68 | 741443303-741443381 | 0.943859 | Ortholog | 1/10 | 4/166 |
48 | braFlo1-123 | mir-1701 | gga-miR-1701 | 18/20 | chrUn | - | 51-69 | 264507958-264508029 | 0.869988 | Ortholog | 1/19 | 2/41 |
Total | 48 record(s). |